Data availability

ST Dataset Info Table

ST Dataset	ST type	Abbreviations	ST protocol	Num. of slices	Data Source	Annotation Source	Download link
Human Dorsal Lateral Prefrontal Cortex data	Sequencing-based	DLPFC	10x Visium	12	spatialLIBD	spatialLIBD	link
Human Breast Cancer Block A section 1	Sequencing-based	HBCA1	10x Visium	1	Breast Cancer Block A	SEDR Analysis Data	link
Mouse Brain Section 2 Sagittal Anterior and Posterior	Sequencing-based	MB2SA&P	10x Visium	2	Mouse Brain Serial Section 2 Sagittal Anterior	ConGI Analysis Data	link
HER2 Positive Breast Tumors	Sequencing-based	HER2+BT	Spatial Transcriptomics	8	HER2st	HER2st	link
Mouse Hippocampus	Sequencing-based	MHPC	Slide-seq v2	1	SCP815 Puck_200115_08	SCP815 Puck_200115_08	link
MOSTA Embryo	Sequencing-based	Embryo	Stereo-seq	\(>=50\)	MOSTA Resource	MOSTA Resource	link
Mouse Visual Cortex	Sequencing-based	MVC	STARmap	1	STARmap Resources	STARmap Resources	link
Mouse Prefrontal Cortex	Sequencing-based	MPFC	STARmap	3	STARmap Resources	BASS Analysis Data	link
Mouse Hypothalamus	Imaging-based	MHypo	MERFISH	5	Datadryad	BASS Analysis Data	link
Mouse Brain	Imaging-based	MB	MERFISH	33	Zenodo Records	link	link